Publications

D Silvestro, RCM Warnock, A Gavryushkina, T Stadler. Closing the gap between palaeontological and neontological speciation and extinction rate estimates, Nature Communications 9:5237, 2018

T Stadler, A Gavryushkina, RCM Warnock, AJ Drummond, TA Heath. The fossilized birth-death model for the analysis of stratigraphic range data under different speciation modes, Journal of Theoretical Biology, 447:41-55, 2018

A Gavryushkina, TA Heath, D Ksepka, T Stadler, D Welch, and AJ Drummond. Bayesian total evidence dating reveals the recent radiation of penguins. Systematic Biology 66 (1): 57-73, doi: 10.1093/sysbio/syw060, 2017.

O Ratmann, A van Sighem, S Jurriaans, A Wensing, D Bezemer, A Gavryushkina, F de Wolf, P Reiss, C Fraser. Sources of HIV infection among men having sex with men and implications for prevention, Science Translational Medicine 8(320): 320ra2-320ra2, 2016.

A Gavryushkina, D Welch, T Stadler, and AJ Drummond. Bayesian inference of sampled ancestor trees for epidemiology and fossil calibration, PLoS Computational Biology 10(12): e1003919, doi:10.1371/journal.pcbi.1003919, 2014.

A Gavryushkina, D Welch, and AJ Drummond. Recursive Algorithms for Phylogenetic Tree Counting, Algorithms for Molecular Biology 8:26, 2013.

A Gavryushkina and A Moskvina. A Generalized Operator Notation and its Properties, Reports of Irkutsk State University, 2012.

A Gavryushkina. The theory of lists and Sigma-definability, Reports of Irkutsk State University, 2011.

AA Gavryushkina. A Scott Rank of Automatic Partial Orderings, NSU Bulletin, 2010.

AA Gavryushkina. On Automatic and Decidable Linear Orderings. Siberian Electronic Mathematical Reports, 2010, http://semr.math.nsc.ru.

AA Revenko. The Autostability of Ordinals and Low Rank Linear Orders with Respect to Automatic Presentations, NSU Bulletin, 2008.